Selected publications

Bohutínská M, Petříková E, Booker TR, Vives Cobo C, Vlček J, Šrámková G, Poupětová A, Hojka J, Marhold K, Yant L*, Kolář F*, Schmickl R* (2024): Polyploids broadly generate novel haplotypes from trans-specific variation in Arabidopsis arenosa and Arabidopsis lyrata. PLOS Genetics 20: e1011521.

Salony S, Clo J, Vallejo-Marín M, Kolář F (2024): Establishment of polyploidy in natural populations of Mimulus guttatus. Plant Systematics and Evolution 310, 30

Bartolić P, Morgan EJ, Padilla García N, Kolář F (2024): Ploidy as a leaky reproductive barrier: mechanisms, rates and evolutionary significance of interploidy gene flow. Annals of Botany 134:537–550.

Wos G, Požárová D, Kolář F (2023): Role of phenotypic and transcriptomic plasticity in alpine adaptation of Arabidopsis arenosa. – Molecular Ecology. 32: 5771-5784

Padilla-García N, Šrámková, G., Záveská, E., Šlenker, M., Clo, J., Zeisek, V., Lučanová M., Rurane I, Kolář F & Marhold, K. (2022): The importance of considering the evolutionary history of polyploids when assessing climatic niche evolution. – Journal of Biogeography. 50: 86-100

Clo J, Padilla-García N, Kolář F. (2022): Polyploidization as an opportunistic mutation: the role of genetic drift and unreduced gametes formation in polyploid establishment. – Journal of Evolutionary Biology. 35: 1099–1109.

Wos G, Arc E, Hülber K, Konečná V, Knotek A, Požárová D, Bertel C, Kaplenig D, Mandáková T, Neuner G, Schönswetter P, Kranner I, Kolář F (2022): Parallel local adaptation to an alpine environment in Arabidopsis arenosa. – Journal of Ecology 110: 2448–2461

Konečná V, Šustr M, Požárová D, Čertner M, Krejčová A, Tylová E, Kolář F (2022): Genomic basis and phenotypic manifestation of (non-)parallel serpentine adaptation in Arabidopsis arenosa. – Evolution 76: 2315–2331

Clo J, Kolář F (2021): Short- and long-term consequences of genome doubling: a meta-analysis. – American Journal of Botany doi: 10.1002/ajb2.1759.

Konečná V, Bray S, Vlček J, Bohutínská M, Požárová D, Roy Choudhury R, Bollmann-Giolai A, Flis P, Salt DE, Parisod C, Yant L, Kolář F (2021): Parallel adaptation in an autopolyploid is dominated by repeated recruitment of shared alleles. – Nature Communications 12:4979. 

Bohutínská M, Vlček J, Yair S, Laenen B, Konečná V, Fracassetti M, Slotte T, Kolář F (2021): Genomic basis of parallel adaptation varies with divergence in Arabidopsis and its relatives. – Proceedings of the National Academy of Sciences 118: e2022713118.

Morgan EJ, Čertner M, Lučanová M, Deniz U, Kubíková K, Venon A, Kovářík O, Lafon Placette C, Kolář F (2021): Disentangling the components of triploid block and its fitness consequences in natural diploid-tetraploid contact zones of Arabidopsis arenosa. – New Phytologist, doi:10.1111/nph.17357.

Bohutínská M, Alston M, Monnahan P, Mandáková T, Bray S, Paajanen P, Kolář F, Yant L (2021): Novelty and convergence in adaptation to whole genome duplication. – Molecular Biology and Evolution doi: 10.1093/molbev/msab096 

Bohutínská M, Handrick V, Yant L, Schmickl R, Kolář F, Bomblies K, Paajanen P (2021): De-novo mutation and rapid protein (co-)evolution during meiotic adaptation in Arabidopsis arenosa. – Molecular Biology and Evolution doi: 10.1093/molbev/msab001

Wos G, Bohutínská M, Nosková M, Mandáková T, Kolář F (2021): Parallelism in gene expression between foothill and alpine ecotypes in Arabidopsis arenosa. – The Plant Journal doi: 10.1111/tpj.15105 link

Knotek A, Wos G, Požárová D, Konečná V, Šrámková G, Bohutínská M, Zeisek V, Marhold K, Kolář F (2020): Parallel alpine differentiation in Arabidopsis arenosa. – Frontiers in Plant Science doi: 10.3389/fpls.2020.561526

Monnahan P*, Kolář F*, Baduel P*, Sailer C, Koch J, Horvath R, Laenen B, Schmickl R, Paajanen P, Šrámková G, Bohutínská M, Arnold B, Weismann C, Marhold K, Slotte T, Bomblies K, Yant L (2019): Pervasive population genomic consequences of genome duplication in Arabidopsis arenosa. – Nature Ecology and Evolution, doi 10.1038/s41559-019-0807-4. *equal contribution

Čertner M, Sudová R, Weiser M, Suda J, Kolář F (2018): Ploidy-altered phenotype interacts with local environment and may enhance polyploid establishment in Knautia serpentinicola (Caprifoliaceae). – New Phytologist 221: 1117–1127.

Kolář F, Čertner M, Suda J, Schönswetter P, Husband BC (2017): Mixed-ploidy species: progress and opportunities in polyploid research. – Trends in Plant Science, 22: 1041-1055.

Kolář F*, Fuxová G*, Záveská E*, Nagano AJ, Hyklová L, Lučanová M, Kudoh H, Marhold K (2016): Northern glacial refugia and altitudinal niche divergence shape genome-wide differentiation in the emerging plant model Arabidopsis arenosa. – Molecular Ecology 25: 3929-3949, *equal contribution